- Resequencing service
- - Multiplexing available
- - Bioinformatic analysis
- - Download sheet
Derek Butler
Derek is responsible for the Genome analysis services, which are based on next generation sequencing technology. Together with Erwin van Rijn he also handles the Gene to Protein services. In addition to this, he works on a number of collaborative research projects with universities and research institutes the objective of which is to develop novel and more efficient DNA-related services.
CALL +031 (0)71 523 3917
MAIL info@baseclear.nl
Resequencing service
Our Resequencing Service may be helpful to discover and confirm SNPs, to identify chromosomal rearrangements, to map break points and to detect rare variants.
Approach
Our product specialist will help the customer to decide which combination of single read, paired-end or mate-pair sequencing should be performed.
Starting material
Genomic DNA (5-10 ug) and appropriate reference sequence should be supplied by the customer.
Sequencing
- Sequencing with the Illumina GAIIx
- Sequence enrichment can be performed for specific regions
- Multiplex options available to sequence up to 12 samples in a single lane.
Bioinformatics
- Supply of the raw sequencing data (fasta or scarf)
- Optional: Alignment against the reference sequence. The customer will get the contigs that are created during the alignment.
- Optional: Downstream options such as SNP/indel identification and discovery.
The bioinformatics strategy will be determined in close collaboration between the customer, our bioinformatics specialist and product specialist Genome Analysis.
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